STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YKL018WSWD2-like protein. (329 aa)    
Predicted Functional Partners:
YPR107C
YTH1-like protein.
    
 0.997
YNL222W
SSU72-like protein.
   
 0.996
YJR093C
FIP1-like protein.
   
 0.995
YLR277C
YSH1-like protein.
   
 0.995
YDR301W
CFT1-like protein.
    
 0.995
YNL317W
PFS2-like protein.
  
 0.994
YLR115W
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.994
YKL059C
MPE1-like protein.
    
 0.991
YDR436W
Serine/threonine-protein phosphatase.
    
 0.975
YHR119W
Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.
   
 0.971
Your Current Organism:
Saccharomyces kudriavzevii
NCBI taxonomy Id: 226230
Other names: S. kudriavzevii IFO 1802, Saccharomyces kudriavzevii IFO 1802
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