Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
YCR077C | YDR378C | J6EJC2 | J6EFA1 | PAT1-like protein. | LSM6-like protein. | 0.999 |
YCR077C | YER112W | J6EJC2 | J4TZ08 | PAT1-like protein. | LSM4-like protein. | 0.999 |
YCR077C | YJL124C | J6EJC2 | J6EFH1 | PAT1-like protein. | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | 0.999 |
YCR077C | YLR438C-A | J6EJC2 | J6EF98 | PAT1-like protein. | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
YDR378C | YCR077C | J6EFA1 | J6EJC2 | LSM6-like protein. | PAT1-like protein. | 0.999 |
YDR378C | YDR473C | J6EFA1 | J6EP62 | LSM6-like protein. | PRP3-like protein. | 0.978 |
YDR378C | YER029C | J6EFA1 | J5RT94 | LSM6-like protein. | SMB1-like protein. | 0.922 |
YDR378C | YER112W | J6EFA1 | J4TZ08 | LSM6-like protein. | LSM4-like protein. | 0.999 |
YDR378C | YJL124C | J6EFA1 | J6EFH1 | LSM6-like protein. | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | 0.999 |
YDR378C | YJR022W | J6EFA1 | J8THT4 | LSM6-like protein. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.998 |
YDR378C | YKL173W | J6EFA1 | J5PSD4 | LSM6-like protein. | SNU114-like protein. | 0.892 |
YDR378C | YLR438C-A | J6EFA1 | J6EF98 | LSM6-like protein. | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
YDR378C | YMR268C | J6EFA1 | J5RVT1 | LSM6-like protein. | PRP24-like protein. | 0.987 |
YDR378C | YOR159C | J6EFA1 | J6EGT2 | LSM6-like protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.987 |
YDR473C | YDR378C | J6EP62 | J6EFA1 | PRP3-like protein. | LSM6-like protein. | 0.978 |
YDR473C | YER029C | J6EP62 | J5RT94 | PRP3-like protein. | SMB1-like protein. | 0.955 |
YDR473C | YER112W | J6EP62 | J4TZ08 | PRP3-like protein. | LSM4-like protein. | 0.978 |
YDR473C | YJR022W | J6EP62 | J8THT4 | PRP3-like protein. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.991 |
YDR473C | YKL173W | J6EP62 | J5PSD4 | PRP3-like protein. | SNU114-like protein. | 0.985 |
YDR473C | YLR438C-A | J6EP62 | J6EF98 | PRP3-like protein. | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.987 |
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