STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YLR315WNKP2-like protein. (156 aa)    
Predicted Functional Partners:
YDR383C
NKP1-like protein.
    
 
 0.984
YGR179C
OKP1-like protein.
    
 
 0.888
YBR107C
IML3-like protein.
    
 
 0.845
YDR254W
CHL4-like protein.
    
 
 0.843
YPR046W
MCM16-like protein.
    
 
 0.836
YLR381W
CTF3-like protein.
    
 
 0.824
YJR135C
MCM22-like protein.
    
 
 0.769
YKL049C
CSE4-like protein.
    
 
 0.645
YIR010W
DSN1-like protein.
    
 
 0.642
YFR046C
CNN1-like protein.
    
 
 0.496
Your Current Organism:
Saccharomyces kudriavzevii
NCBI taxonomy Id: 226230
Other names: S. kudriavzevii IFO 1802, Saccharomyces kudriavzevii IFO 1802
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.