STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN68146.1Hypothetical protein. (137 aa)    
Predicted Functional Partners:
SIN68140.1
Hypothetical protein.
       0.756
SIN82843.1
Thiosulfate dehydrogenase.
 
     0.730
SIN98185.1
Molecular chaperone HtpG.
    
   0.499
SIN99888.1
Repeat domain-containing protein.
  
     0.477
SIN68973.1
Repeat domain-containing protein.
  
     0.452
SIO17484.1
FG-GAP repeat-containing protein.
  
     0.433
SIO24261.1
Repeat domain-containing protein.
  
     0.425
SIO24317.1
FG-GAP repeat-containing protein.
  
     0.425
SIN66692.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.409
SIO24248.1
Repeat domain-containing protein.
  
     0.404
Your Current Organism:
Algoriphagus halophilus
NCBI taxonomy Id: 226505
Other names: A. halophilus, Algoriphagus halophilus (Yi and Chun 2004) Nedashkovskaya et al. 2004, DSM 15292, Flexibacteraceae bacterium IMSNU 14013, Hongiella halophila, Hongiella halophila Yi and Chun 2004, IMSNU 14013, KCTC 12051, strain JC 2051
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.