STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN70020.1Arylsulfatase. (527 aa)    
Predicted Functional Partners:
SIN77352.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
  
 
   0.641
SIO04471.1
Phosphoserine phosphatase.
  
     0.540
SIO02434.1
Uncharacterized conserved protein.
  
     0.539
SIN70010.1
Hypothetical protein.
       0.500
SIO22380.1
Gliding motility-associated lipoprotein GldK/gliding motility-associated lipoprotein GldK,TIGR03529.
  
 
   0.497
SIN70027.1
Hypothetical protein.
       0.470
SIN73285.1
Hypothetical protein.
  
     0.442
SIO04501.1
Hypothetical protein.
  
     0.441
SIN99872.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
  
 
   0.431
SIO04337.1
Gliding motility-associated lipoprotein GldJ.
  
 
   0.421
Your Current Organism:
Algoriphagus halophilus
NCBI taxonomy Id: 226505
Other names: A. halophilus, Algoriphagus halophilus (Yi and Chun 2004) Nedashkovskaya et al. 2004, DSM 15292, Flexibacteraceae bacterium IMSNU 14013, Hongiella halophila, Hongiella halophila Yi and Chun 2004, IMSNU 14013, KCTC 12051, strain JC 2051
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