STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN72691.1DNA polymerase III, delta subunit. (340 aa)    
Predicted Functional Partners:
SIN94132.1
DNA polymerase III, alpha subunit.
  
 0.999
SIO23773.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 
 0.999
dnaX
DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
 
 
 0.983
SIO12929.1
DNA polymerase-3 subunit delta'.
 
 
 0.941
SIN67508.1
DNA polymerase III, alpha subunit.
   
 0.939
SIN79407.1
DNA polymerase-3 subunit epsilon.
   
 0.933
SIN77206.1
DNA polymerase-3 subunit epsilon.
  
 
 0.930
SIN65174.1
Hypothetical protein.
   
 0.903
SIN98367.1
DNA polymerase III, epsilon subunit.
    
 0.845
SIN72699.1
Outer membrane protein assembly factor BamD, BamD/ComL family.
 
     0.675
Your Current Organism:
Algoriphagus halophilus
NCBI taxonomy Id: 226505
Other names: A. halophilus, Algoriphagus halophilus (Yi and Chun 2004) Nedashkovskaya et al. 2004, DSM 15292, Flexibacteraceae bacterium IMSNU 14013, Hongiella halophila, Hongiella halophila Yi and Chun 2004, IMSNU 14013, KCTC 12051, strain JC 2051
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.