STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN73808.16-bladed beta-propeller protein. (409 aa)    
Predicted Functional Partners:
SIO03529.1
Glutamate synthase (NADH) large subunit.
    
  0.833
SIO26250.1
Conserved repeat domain-containing protein/gliding motility-associated C-terminal domain-containing protein.
  
 
   0.785
SIO21439.1
Hypothetical protein.
  
  
  0.775
SIO01804.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
   0.769
SIN96914.1
TonB-dependent Receptor Plug Domain.
  
    0.768
SIN77181.1
Hypothetical protein.
  
     0.766
SIN96993.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
  
     0.766
SIN81165.1
Gliding motility-associated C-terminal domain-containing protein.
  
  
  0.765
SIN71869.1
CarboxypepD_reg-like domain-containing protein.
  
 
   0.762
SIO03392.1
Hypothetical protein.
  
     0.762
Your Current Organism:
Algoriphagus halophilus
NCBI taxonomy Id: 226505
Other names: A. halophilus, Algoriphagus halophilus (Yi and Chun 2004) Nedashkovskaya et al. 2004, DSM 15292, Flexibacteraceae bacterium IMSNU 14013, Hongiella halophila, Hongiella halophila Yi and Chun 2004, IMSNU 14013, KCTC 12051, strain JC 2051
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.