Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIN74995.1 | SIN75006.1 | SAMN05444394_1458 | SAMN05444394_1459 | Hypothetical protein. | Argininosuccinate synthase. | 0.994 |
SIN74995.1 | SIN75027.1 | SAMN05444394_1458 | SAMN05444394_1461 | Hypothetical protein. | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.825 |
SIN74995.1 | SIN75037.1 | SAMN05444394_1458 | SAMN05444394_1462 | Hypothetical protein. | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.904 |
SIN74995.1 | SIN75059.1 | SAMN05444394_1458 | SAMN05444394_1464 | Hypothetical protein. | Acetylornithine deacetylase. | 0.882 |
SIN74995.1 | argB | SAMN05444394_1458 | SAMN05444394_1463 | Hypothetical protein. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.883 |
SIN74995.1 | argC | SAMN05444394_1458 | SAMN05444394_1460 | Hypothetical protein. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.889 |
SIN74995.1 | argH | SAMN05444394_1458 | SAMN05444394_1465 | Hypothetical protein. | Argininosuccinate lyase. | 0.913 |
SIN75006.1 | SIN74995.1 | SAMN05444394_1459 | SAMN05444394_1458 | Argininosuccinate synthase. | Hypothetical protein. | 0.994 |
SIN75006.1 | SIN75027.1 | SAMN05444394_1459 | SAMN05444394_1461 | Argininosuccinate synthase. | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.968 |
SIN75006.1 | SIN75037.1 | SAMN05444394_1459 | SAMN05444394_1462 | Argininosuccinate synthase. | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.998 |
SIN75006.1 | SIN75059.1 | SAMN05444394_1459 | SAMN05444394_1464 | Argininosuccinate synthase. | Acetylornithine deacetylase. | 0.981 |
SIN75006.1 | argB | SAMN05444394_1459 | SAMN05444394_1463 | Argininosuccinate synthase. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.973 |
SIN75006.1 | argC | SAMN05444394_1459 | SAMN05444394_1460 | Argininosuccinate synthase. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.986 |
SIN75006.1 | argC-2 | SAMN05444394_1459 | SAMN05444394_2611 | Argininosuccinate synthase. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.836 |
SIN75006.1 | argH | SAMN05444394_1459 | SAMN05444394_1465 | Argininosuccinate synthase. | Argininosuccinate lyase. | 0.998 |
SIN75006.1 | argJ | SAMN05444394_1459 | SAMN05444394_2610 | Argininosuccinate synthase. | Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.894 |
SIN75027.1 | SIN74995.1 | SAMN05444394_1461 | SAMN05444394_1458 | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Hypothetical protein. | 0.825 |
SIN75027.1 | SIN75006.1 | SAMN05444394_1461 | SAMN05444394_1459 | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Argininosuccinate synthase. | 0.968 |
SIN75027.1 | SIN75037.1 | SAMN05444394_1461 | SAMN05444394_1462 | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.980 |
SIN75027.1 | SIN75059.1 | SAMN05444394_1461 | SAMN05444394_1464 | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Acetylornithine deacetylase. | 0.973 |
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