STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN76338.1Methane oxygenase PmoA. (363 aa)    
Predicted Functional Partners:
SIO03529.1
Glutamate synthase (NADH) large subunit.
    
 
 0.848
SIN76352.1
Sugar phosphate isomerase/epimerase.
 
    0.776
SIN76362.1
Predicted dehydrogenase.
 
     0.769
SIN72536.1
Oxidoreductase family, NAD-binding Rossmann fold.
  
     0.616
SIN77984.1
Sugar phosphate isomerase/epimerase.
  
    0.593
SIO14770.1
Repeat domain-containing protein.
  
     0.589
SIN80507.1
Amino acid adenylation domain-containing protein.
    
 
 0.572
SIO14563.1
Sugar phosphate isomerase/epimerase.
  
    0.568
SIN74207.1
Amino acid adenylation domain-containing protein.
    
 
 0.553
SIN65969.1
Sialidase-1.
  
     0.544
Your Current Organism:
Algoriphagus halophilus
NCBI taxonomy Id: 226505
Other names: A. halophilus, Algoriphagus halophilus (Yi and Chun 2004) Nedashkovskaya et al. 2004, DSM 15292, Flexibacteraceae bacterium IMSNU 14013, Hongiella halophila, Hongiella halophila Yi and Chun 2004, IMSNU 14013, KCTC 12051, strain JC 2051
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