STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN82453.1Putative ABC transport system permease protein. (808 aa)    
Predicted Functional Partners:
SIN82643.1
Putative ABC transport system ATP-binding protein.
  
  0.855
SIN82654.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.853
SIN82214.1
ABC-type lipoprotein export system, ATPase component.
  
  0.826
SIN82671.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.772
SIN66543.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.770
SIN82462.1
MacB-like core domain-containing protein.
 
    
0.580
SIN82443.1
Putative ABC transport system permease protein.
 
    
0.549
SIN70747.1
Putative ABC transport system ATP-binding protein.
  
  0.518
SIN66548.1
DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.
  
     0.505
SIN82662.1
DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.
  
     0.498
Your Current Organism:
Algoriphagus halophilus
NCBI taxonomy Id: 226505
Other names: A. halophilus, Algoriphagus halophilus (Yi and Chun 2004) Nedashkovskaya et al. 2004, DSM 15292, Flexibacteraceae bacterium IMSNU 14013, Hongiella halophila, Hongiella halophila Yi and Chun 2004, IMSNU 14013, KCTC 12051, strain JC 2051
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