STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN84649.1Lipid kinase, YegS/Rv2252/BmrU family. (301 aa)    
Predicted Functional Partners:
SIN74207.1
Amino acid adenylation domain-containing protein.
  
 
 0.851
SIN84664.1
Phosphatidate phosphatase APP1.
 
     0.848
groL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
    
  0.844
SIN69455.1
Glutamate or tyrosine decarboxylase.
    
 0.661
SIO23392.1
Glycerol-3-phosphate dehydrogenase.
    
 0.613
SIN84634.1
Protein of unknown function.
       0.601
SIN96176.1
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.597
SIN74486.1
Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
   
 
 0.586
SIN73788.1
L-2-hydroxyglutarate oxidase.
   
 
  0.552
SIO18732.1
O-Glycosyl hydrolase.
    
  0.552
Your Current Organism:
Algoriphagus halophilus
NCBI taxonomy Id: 226505
Other names: A. halophilus, Algoriphagus halophilus (Yi and Chun 2004) Nedashkovskaya et al. 2004, DSM 15292, Flexibacteraceae bacterium IMSNU 14013, Hongiella halophila, Hongiella halophila Yi and Chun 2004, IMSNU 14013, KCTC 12051, strain JC 2051
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