STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN85236.1Cytochrome c oxidase cbb3-type subunit 3. (304 aa)    
Predicted Functional Partners:
SIN85265.1
Cytochrome c oxidase cbb3-type subunit I/II; Manually curated; Belongs to the heme-copper respiratory oxidase family.
 
 0.999
SIN85222.1
Cytochrome c oxidase accessory protein FixG.
    0.955
SIN85300.1
Cu+-exporting ATPase.
 
     0.946
SIN85206.1
FixH protein.
 
   0.938
SIN85249.1
Hypothetical protein.
 
  
  0.917
SIO04307.1
Cytochrome c oxidase subunit 3.
   
  0.904
SIO16852.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.904
SIO16908.1
Cytochrome c oxidase subunit 3.
   
  0.904
SIO16925.1
Cytochrome c oxidase subunit 3.
   
  0.904
SIN85191.1
Hypothetical protein.
 
     0.903
Your Current Organism:
Algoriphagus halophilus
NCBI taxonomy Id: 226505
Other names: A. halophilus, Algoriphagus halophilus (Yi and Chun 2004) Nedashkovskaya et al. 2004, DSM 15292, Flexibacteraceae bacterium IMSNU 14013, Hongiella halophila, Hongiella halophila Yi and Chun 2004, IMSNU 14013, KCTC 12051, strain JC 2051
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