STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN97432.1Hypothetical protein. (232 aa)    
Predicted Functional Partners:
SIN97416.1
Outer membrane insertion C-terminal signal/RHS repeat-associated core domain-containing protein; Manually curated.
 
     0.712
SIN97388.1
Hypothetical protein.
  
 
 
0.576
SIN97400.1
Hypothetical protein.
       0.572
SIN76213.1
Methyltransferase domain-containing protein.
  
     0.480
SIN83577.1
Starch-binding associating with outer membrane.
  
 
  0.467
SIO22772.1
Protein of unknown function.
  
     0.462
SIO24237.1
PAP2 superfamily protein.
  
 
  0.447
SIN78571.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
  
     0.439
SIN71361.1
Hypothetical protein.
  
     0.420
SIN78614.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.420
Your Current Organism:
Algoriphagus halophilus
NCBI taxonomy Id: 226505
Other names: A. halophilus, Algoriphagus halophilus (Yi and Chun 2004) Nedashkovskaya et al. 2004, DSM 15292, Flexibacteraceae bacterium IMSNU 14013, Hongiella halophila, Hongiella halophila Yi and Chun 2004, IMSNU 14013, KCTC 12051, strain JC 2051
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.