STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIO04386.1Uncharacterized membrane protein YphA, DoxX/SURF4 family. (147 aa)    
Predicted Functional Partners:
SIN83119.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
     0.597
SIO24975.1
Hypothetical protein.
  
     0.565
SIN83204.1
Hypothetical protein.
  
     0.564
SIN68173.1
Hypothetical protein.
  
     0.530
SIN67029.1
3',5'-cyclic AMP phosphodiesterase CpdA.
  
     0.529
SIO04368.1
Glycosyl hydrolases family 16.
       0.520
SIO24169.1
Mycothiol system anti-sigma-R factor.
 
   
 0.458
SIO25014.1
Hypothetical protein.
  
     0.452
SIO24999.1
Protein of unknown function.
  
     0.435
SIN80714.1
Hypothetical protein.
  
     0.413
Your Current Organism:
Algoriphagus halophilus
NCBI taxonomy Id: 226505
Other names: A. halophilus, Algoriphagus halophilus (Yi and Chun 2004) Nedashkovskaya et al. 2004, DSM 15292, Flexibacteraceae bacterium IMSNU 14013, Hongiella halophila, Hongiella halophila Yi and Chun 2004, IMSNU 14013, KCTC 12051, strain JC 2051
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.