STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIO07770.1Hypothetical protein. (374 aa)    
Predicted Functional Partners:
SIO07610.1
Hypothetical protein.
  
   0.896
SIO07783.1
Protein of unknown function.
   
 
 0.890
SIO07634.1
Rhs element Vgr protein.
  
   0.869
SIO07595.1
Baseplate J-like protein.
  
 
 0.839
SIO07647.1
Hypothetical protein.
  
   0.837
SIO07583.1
Hypothetical protein.
   
 
 0.813
SIO07714.1
Conserved hypothetical phage tail region protein.
  
   0.779
SIO07728.1
Conserved hypothetical phage tail region protein.
  
   0.779
SIN80141.1
Hypothetical protein.
  
   0.778
SIO07757.1
Hypothetical protein.
       0.746
Your Current Organism:
Algoriphagus halophilus
NCBI taxonomy Id: 226505
Other names: A. halophilus, Algoriphagus halophilus (Yi and Chun 2004) Nedashkovskaya et al. 2004, DSM 15292, Flexibacteraceae bacterium IMSNU 14013, Hongiella halophila, Hongiella halophila Yi and Chun 2004, IMSNU 14013, KCTC 12051, strain JC 2051
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.