STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN62958.1Mannose-1-phosphate guanylyltransferase (GDP). (358 aa)    
Predicted Functional Partners:
SFO28561.1
Phosphomannomutase.
 
 
 0.848
SFO74429.1
Mannose-1-phosphate guanylyltransferase.
  
  
 
0.840
SFO74259.1
GDPmannose 4,6-dehydratase.
  
 
 0.829
gmd
GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
 
 0.829
SFN62925.1
Arabinose-5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily.
       0.800
SFN62893.1
ATP-dependent DNA helicase RecQ.
       0.583
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
       0.562
SFO49278.1
UDP-glucose dehydrogenase.
  
 
 0.452
SFN76968.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
 
 0.446
SFO33850.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
  
 
 0.446
Your Current Organism:
Algoriphagus ornithinivorans
NCBI taxonomy Id: 226506
Other names: A. ornithinivorans, Algoriphagus ornithinivorans (Yi and Chun 2004) Nedashkovskaya et al. 2007, DSM 15282, Flexibacteraceae bacterium IMSNU 14014, Hongiella ornithinivorans, Hongiella ornithinivorans Yi and Chun 2004, IMSNU 14014, KCTC 12052, strain JC2052
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