Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFN62718.1 | SFN65678.1 | SAMN04488519_101186 | SAMN04488519_101271 | Hypothetical protein. | Iron complex outermembrane recepter protein. | 0.495 |
SFN65651.1 | SFN65678.1 | SAMN04488519_101270 | SAMN04488519_101271 | Hypothetical protein. | Iron complex outermembrane recepter protein. | 0.464 |
SFN65651.1 | SFN65706.1 | SAMN04488519_101270 | SAMN04488519_101272 | Hypothetical protein. | Uncharacterized iron-regulated membrane protein. | 0.464 |
SFN65678.1 | SFN62718.1 | SAMN04488519_101271 | SAMN04488519_101186 | Iron complex outermembrane recepter protein. | Hypothetical protein. | 0.495 |
SFN65678.1 | SFN65651.1 | SAMN04488519_101271 | SAMN04488519_101270 | Iron complex outermembrane recepter protein. | Hypothetical protein. | 0.464 |
SFN65678.1 | SFN65706.1 | SAMN04488519_101271 | SAMN04488519_101272 | Iron complex outermembrane recepter protein. | Uncharacterized iron-regulated membrane protein. | 0.929 |
SFN65678.1 | SFN70256.1 | SAMN04488519_101271 | SAMN04488519_101403 | Iron complex outermembrane recepter protein. | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.495 |
SFN65678.1 | SFN70293.1 | SAMN04488519_101271 | SAMN04488519_101404 | Iron complex outermembrane recepter protein. | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.495 |
SFN65678.1 | SFN82504.1 | SAMN04488519_101271 | SAMN04488519_102170 | Iron complex outermembrane recepter protein. | TonB family C-terminal domain-containing protein. | 0.495 |
SFN65678.1 | SFN83293.1 | SAMN04488519_101271 | SAMN04488519_102192 | Iron complex outermembrane recepter protein. | TonB family C-terminal domain-containing protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.495 |
SFN65678.1 | SFO08679.1 | SAMN04488519_101271 | SAMN04488519_103370 | Iron complex outermembrane recepter protein. | Hypothetical protein. | 0.495 |
SFN65678.1 | SFO41074.1 | SAMN04488519_101271 | SAMN04488519_106162 | Iron complex outermembrane recepter protein. | Hypothetical protein. | 0.495 |
SFN65678.1 | SFO68453.1 | SAMN04488519_101271 | SAMN04488519_111108 | Iron complex outermembrane recepter protein. | Isochorismate synthase. | 0.460 |
SFN65706.1 | SFN65651.1 | SAMN04488519_101272 | SAMN04488519_101270 | Uncharacterized iron-regulated membrane protein. | Hypothetical protein. | 0.464 |
SFN65706.1 | SFN65678.1 | SAMN04488519_101272 | SAMN04488519_101271 | Uncharacterized iron-regulated membrane protein. | Iron complex outermembrane recepter protein. | 0.929 |
SFN70256.1 | SFN65678.1 | SAMN04488519_101403 | SAMN04488519_101271 | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Iron complex outermembrane recepter protein. | 0.495 |
SFN70256.1 | SFN70293.1 | SAMN04488519_101403 | SAMN04488519_101404 | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.491 |
SFN70293.1 | SFN65678.1 | SAMN04488519_101404 | SAMN04488519_101271 | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Iron complex outermembrane recepter protein. | 0.495 |
SFN70293.1 | SFN70256.1 | SAMN04488519_101404 | SAMN04488519_101403 | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.491 |
SFN82504.1 | SFN65678.1 | SAMN04488519_102170 | SAMN04488519_101271 | TonB family C-terminal domain-containing protein. | Iron complex outermembrane recepter protein. | 0.495 |
page 1 of 2