STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO58604.1Hypothetical protein. (152 aa)    
Predicted Functional Partners:
SFO58551.1
Uracil phosphoribosyltransferase.
       0.791
SFO58578.1
cation:H+ antiporter.
       0.789
SFO51752.1
Hypothetical protein.
  
     0.770
SFN91832.1
Hypothetical protein.
  
     0.767
SFO70862.1
Hypothetical protein.
  
     0.765
SFO46725.1
Hypothetical protein.
  
     0.756
SFO71526.1
Antitoxin component YwqK of the YwqJK toxin-antitoxin module.
  
     0.756
SFN83941.1
Hypothetical protein.
  
     0.754
SFO41406.1
Phosphoribosylanthranilate isomerase; Belongs to the TrpF family.
  
     0.753
SFO58685.1
Hypothetical protein.
  
     0.744
Your Current Organism:
Algoriphagus ornithinivorans
NCBI taxonomy Id: 226506
Other names: A. ornithinivorans, Algoriphagus ornithinivorans (Yi and Chun 2004) Nedashkovskaya et al. 2007, DSM 15282, Flexibacteraceae bacterium IMSNU 14014, Hongiella ornithinivorans, Hongiella ornithinivorans Yi and Chun 2004, IMSNU 14014, KCTC 12052, strain JC2052
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.