STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO64269.1Cytochrome c. (883 aa)    
Predicted Functional Partners:
SFN99566.1
Hypothetical protein.
  
  0.991
SFN90305.1
Putative membrane-bound dehydrogenase domain-containing protein.
 
  
 0.938
SFO38036.1
Putative heme-binding domain-containing protein.
 
 
  0.921
SFO79394.1
Cytochrome c, mono-and diheme variants.
 
 
 0.913
SFN61630.1
Putative membrane-bound dehydrogenase domain-containing protein.
 
 
 0.907
SFO41453.1
Trehalose utilisation.
 
  
  0.871
SFN61843.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
 
  
 
0.867
SFO55538.1
Cytochrome c.
 
  
 
0.853
SFN60037.1
Conserved hypothetical protein, HNE_0200 family.
 
 
 0.844
SFN61654.1
Putative heme-binding domain-containing protein.
 
 
 0.842
Your Current Organism:
Algoriphagus ornithinivorans
NCBI taxonomy Id: 226506
Other names: A. ornithinivorans, Algoriphagus ornithinivorans (Yi and Chun 2004) Nedashkovskaya et al. 2007, DSM 15282, Flexibacteraceae bacterium IMSNU 14014, Hongiella ornithinivorans, Hongiella ornithinivorans Yi and Chun 2004, IMSNU 14014, KCTC 12052, strain JC2052
Server load: low (12%) [HD]