STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_035876C2 domain-containing protein. (462 aa)    
Predicted Functional Partners:
CRG98_029206
QLQ domain-containing protein.
   
 0.712
CRG98_015440
Helicase ATP-binding domain-containing protein.
   
 0.712
CRG98_015442
SnAC domain-containing protein.
   
 0.712
CRG98_015441
Uncharacterized protein.
   
 0.712
CRG98_022541
Uncharacterized protein.
  
 0.629
CRG98_029375
EF-1-gamma C-terminal domain-containing protein.
    
  0.622
CRG98_029374
Uncharacterized protein; Belongs to the GST superfamily.
    
  0.622
CRG98_013144
Uncharacterized protein.
  
  0.584
CRG98_003028
Phytocyanin domain-containing protein.
    
 0.582
CRG98_031008
F-box domain-containing protein.
  
 
  0.580
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.