Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRG98_003028 | CRG98_003596 | A0A2I0L782 | A0A2I0L7F5 | Phytocyanin domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.448 |
CRG98_003028 | CRG98_015440 | A0A2I0L782 | A0A2I0K6I5 | Phytocyanin domain-containing protein. | Helicase ATP-binding domain-containing protein. | 0.460 |
CRG98_003028 | CRG98_015441 | A0A2I0L782 | A0A2I0K8X1 | Phytocyanin domain-containing protein. | Uncharacterized protein. | 0.460 |
CRG98_003028 | CRG98_015442 | A0A2I0L782 | A0A2I0K6K2 | Phytocyanin domain-containing protein. | SnAC domain-containing protein. | 0.460 |
CRG98_003028 | CRG98_016396 | A0A2I0L782 | A0A218VYN8 | Phytocyanin domain-containing protein. | Uncharacterized protein. | 0.603 |
CRG98_003028 | CRG98_021798 | A0A2I0L782 | A0A2I0JNA1 | Phytocyanin domain-containing protein. | B30.2/SPRY domain-containing protein. | 0.995 |
CRG98_003028 | CRG98_029206 | A0A2I0L782 | A0A2I0J2A9 | Phytocyanin domain-containing protein. | QLQ domain-containing protein. | 0.460 |
CRG98_003028 | CRG98_032864 | A0A2I0L782 | A0A2I0IRV9 | Phytocyanin domain-containing protein. | Uncharacterized protein. | 0.926 |
CRG98_003028 | CRG98_032865 | A0A2I0L782 | A0A2I0IRU9 | Phytocyanin domain-containing protein. | Uncharacterized protein. | 0.926 |
CRG98_003596 | CRG98_003028 | A0A2I0L7F5 | A0A2I0L782 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Phytocyanin domain-containing protein. | 0.448 |
CRG98_003596 | CRG98_016396 | A0A2I0L7F5 | A0A218VYN8 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.596 |
CRG98_003596 | CRG98_032864 | A0A2I0L7F5 | A0A2I0IRV9 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.526 |
CRG98_003596 | CRG98_032865 | A0A2I0L7F5 | A0A2I0IRU9 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.526 |
CRG98_015440 | CRG98_003028 | A0A2I0K6I5 | A0A2I0L782 | Helicase ATP-binding domain-containing protein. | Phytocyanin domain-containing protein. | 0.460 |
CRG98_015440 | CRG98_015441 | A0A2I0K6I5 | A0A2I0K8X1 | Helicase ATP-binding domain-containing protein. | Uncharacterized protein. | 0.554 |
CRG98_015440 | CRG98_015442 | A0A2I0K6I5 | A0A2I0K6K2 | Helicase ATP-binding domain-containing protein. | SnAC domain-containing protein. | 0.554 |
CRG98_015440 | CRG98_016396 | A0A2I0K6I5 | A0A218VYN8 | Helicase ATP-binding domain-containing protein. | Uncharacterized protein. | 0.641 |
CRG98_015440 | CRG98_021798 | A0A2I0K6I5 | A0A2I0JNA1 | Helicase ATP-binding domain-containing protein. | B30.2/SPRY domain-containing protein. | 0.463 |
CRG98_015440 | CRG98_029206 | A0A2I0K6I5 | A0A2I0J2A9 | Helicase ATP-binding domain-containing protein. | QLQ domain-containing protein. | 0.554 |
CRG98_015440 | CRG98_032864 | A0A2I0K6I5 | A0A2I0IRV9 | Helicase ATP-binding domain-containing protein. | Uncharacterized protein. | 0.955 |
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