STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_010100Uncharacterized protein. (203 aa)    
Predicted Functional Partners:
CRG98_015231
Uncharacterized protein.
  
     0.512
CRG98_042731
PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family.
  
     0.511
CRG98_029217
Uncharacterized protein.
  
   
 0.510
CRG98_029451
Uncharacterized protein.
  
     0.505
CRG98_045372
PEROXIDASE_4 domain-containing protein.
  
     0.503
CRG98_021283
Uncharacterized protein.
  
     0.502
CRG98_042730
PEROXIDASE_4 domain-containing protein.
  
     0.498
CRG98_001341
PEROXIDASE_4 domain-containing protein.
  
     0.498
CRG98_029449
Uncharacterized protein.
  
     0.497
CRG98_011010
PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family.
  
     0.496
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.