STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_002502MYND-type domain-containing protein. (390 aa)    
Predicted Functional Partners:
CRG98_025126
BZIP domain-containing protein.
    
 0.990
CRG98_025127
Uncharacterized protein.
    
 0.990
CRG98_006784
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
     
 0.893
CRG98_027295
Ubiquitin-like domain-containing protein.
     
 0.824
CRG98_005895
RING-type domain-containing protein.
     
 0.788
CRG98_002862
Ubiquitin-like domain-containing protein.
     
 0.755
CRG98_029172
Uncharacterized protein.
  
  
  0.724
CRG98_021261
PCI domain-containing protein.
   
 
  0.695
CRG98_036854
26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
     
 0.668
CRG98_043550
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 
  0.639
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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