Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CRG98_002067MBOAT_2 domain-containing protein. (342 aa)    
Predicted Functional Partners:
CRG98_002862
Ubiquitin-like domain-containing protein.
    
  0.715
CRG98_000940
Uncharacterized protein.
    
 
 0.692
CRG98_030280
Ubiquitin-like domain-containing protein.
    
  0.684
CRG98_050286
Ubiquitin-like domain-containing protein.
    
  0.684
CRG98_003212
Ubiquitin-like domain-containing protein.
    
  0.684
CRG98_016414
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.647
CRG98_015716
Myb-like domain-containing protein.
    
 0.624
CRG98_021237
Myb-like domain-containing protein.
    
 0.624
CRG98_043267
Myb-like domain-containing protein.
    
 0.624
CRG98_021765
Myb-like domain-containing protein.
    
 0.624
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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