STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_050096Uncharacterized protein. (106 aa)    
Predicted Functional Partners:
CRG98_033788
Uncharacterized protein.
   
   0.801
CRG98_012878
Uncharacterized protein.
   
 
 0.786
CRG98_027767
Uncharacterized protein.
   
 
 0.766
CRG98_044582
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
   
   0.766
CRG98_001488
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.746
CRG98_022655
Uncharacterized protein.
   
 
 0.737
CRG98_021278
Uncharacterized protein.
   
 
 0.715
CRG98_031618
Uncharacterized protein.
   
   0.714
CRG98_036572
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
   0.710
CRG98_015845
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
   0.710
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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