Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRG98_003019 | CRG98_012936 | A0A218WK27 | A0A2I0KDZ4 | Small nuclear ribonucleoprotein-associated protein. | Tr-type G domain-containing protein. | 0.990 |
CRG98_003019 | CRG98_016163 | A0A218WK27 | A0A2I0K719 | Small nuclear ribonucleoprotein-associated protein. | J domain-containing protein. | 0.962 |
CRG98_003019 | CRG98_016164 | A0A218WK27 | A0A2I0K4M4 | Small nuclear ribonucleoprotein-associated protein. | SEC63 domain-containing protein. | 0.962 |
CRG98_003019 | CRG98_017357 | A0A218WK27 | A0A218WRY1 | Small nuclear ribonucleoprotein-associated protein. | SEC63 domain-containing protein. | 0.962 |
CRG98_003019 | CRG98_023808 | A0A218WK27 | A0A2I0JHS5 | Small nuclear ribonucleoprotein-associated protein. | Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. | 0.999 |
CRG98_003019 | CRG98_028930 | A0A218WK27 | A0A2I0J3R1 | Small nuclear ribonucleoprotein-associated protein. | Sm domain-containing protein. | 0.999 |
CRG98_003019 | CRG98_043537 | A0A218WK27 | A0A2I0HXS8 | Small nuclear ribonucleoprotein-associated protein. | Uncharacterized protein. | 0.990 |
CRG98_003019 | CRG98_047606 | A0A218WK27 | A0A2I0HJU1 | Small nuclear ribonucleoprotein-associated protein. | Uncharacterized protein. | 0.962 |
CRG98_003019 | LSM4 | A0A218WK27 | A0A2I0HL41 | Small nuclear ribonucleoprotein-associated protein. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.984 |
CRG98_003019 | LSM8 | A0A218WK27 | A0A2I0K426 | Small nuclear ribonucleoprotein-associated protein. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.978 |
CRG98_012936 | CRG98_003019 | A0A2I0KDZ4 | A0A218WK27 | Tr-type G domain-containing protein. | Small nuclear ribonucleoprotein-associated protein. | 0.990 |
CRG98_012936 | CRG98_016163 | A0A2I0KDZ4 | A0A2I0K719 | Tr-type G domain-containing protein. | J domain-containing protein. | 0.960 |
CRG98_012936 | CRG98_016164 | A0A2I0KDZ4 | A0A2I0K4M4 | Tr-type G domain-containing protein. | SEC63 domain-containing protein. | 0.960 |
CRG98_012936 | CRG98_017357 | A0A2I0KDZ4 | A0A218WRY1 | Tr-type G domain-containing protein. | SEC63 domain-containing protein. | 0.948 |
CRG98_012936 | CRG98_023808 | A0A2I0KDZ4 | A0A2I0JHS5 | Tr-type G domain-containing protein. | Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. | 0.992 |
CRG98_012936 | CRG98_028930 | A0A2I0KDZ4 | A0A2I0J3R1 | Tr-type G domain-containing protein. | Sm domain-containing protein. | 0.994 |
CRG98_012936 | CRG98_047606 | A0A2I0KDZ4 | A0A2I0HJU1 | Tr-type G domain-containing protein. | Uncharacterized protein. | 0.950 |
CRG98_012936 | LSM4 | A0A2I0KDZ4 | A0A2I0HL41 | Tr-type G domain-containing protein. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.960 |
CRG98_012936 | LSM8 | A0A2I0KDZ4 | A0A2I0K426 | Tr-type G domain-containing protein. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.970 |
CRG98_016163 | CRG98_003019 | A0A2I0K719 | A0A218WK27 | J domain-containing protein. | Small nuclear ribonucleoprotein-associated protein. | 0.962 |
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