STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_046994Uncharacterized protein. (299 aa)    
Predicted Functional Partners:
CRG98_035993
HAUS-augmin3 domain-containing protein.
   
 0.991
CRG98_035995
Uncharacterized protein.
   
 0.991
CRG98_035994
Uncharacterized protein.
   
 0.991
CRG98_035992
HAUS-augmin3 domain-containing protein.
   
 0.991
CRG98_048087
Uncharacterized protein.
   
 0.989
CRG98_047476
RRM domain-containing protein.
   
 0.989
CRG98_000394
Uncharacterized protein.
    
 0.971
CRG98_000393
HAUS6_N domain-containing protein.
    
 0.971
CRG98_011917
Uncharacterized protein.
  
  
 0.910
CRG98_002840
t-SNARE coiled-coil homology domain-containing protein.
    
 0.840
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.