Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRG98_011010 | CRG98_046581 | A0A218X0X1 | A0A2I0HMS6 | PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family. | Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. | 0.466 |
CRG98_016375 | CRG98_019151 | A0A2I0K4X2 | A0A2I0JW08 | LOB domain-containing protein. | DOG1 domain-containing protein. | 0.516 |
CRG98_016375 | CRG98_023300 | A0A2I0K4X2 | A0A2I0JJ28 | LOB domain-containing protein. | Uncharacterized protein. | 0.507 |
CRG98_016375 | CRG98_029004 | A0A2I0K4X2 | A0A2I0J301 | LOB domain-containing protein. | Uncharacterized protein. | 0.483 |
CRG98_016375 | CRG98_030763 | A0A2I0K4X2 | A0A2I0IY14 | LOB domain-containing protein. | Uncharacterized protein. | 0.453 |
CRG98_016375 | CRG98_032296 | A0A2I0K4X2 | A0A218VS50 | LOB domain-containing protein. | Uncharacterized protein. | 0.463 |
CRG98_016375 | CRG98_037799 | A0A2I0K4X2 | A0A2I0ICU3 | LOB domain-containing protein. | Uncharacterized protein. | 0.425 |
CRG98_016375 | CRG98_038216 | A0A2I0K4X2 | A0A218Y1X9 | LOB domain-containing protein. | Uncharacterized protein. | 0.501 |
CRG98_016375 | CRG98_041341 | A0A2I0K4X2 | A0A2I0I2S8 | LOB domain-containing protein. | Uncharacterized protein. | 0.509 |
CRG98_016375 | CRG98_046581 | A0A2I0K4X2 | A0A2I0HMS6 | LOB domain-containing protein. | Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. | 0.484 |
CRG98_019151 | CRG98_016375 | A0A2I0JW08 | A0A2I0K4X2 | DOG1 domain-containing protein. | LOB domain-containing protein. | 0.516 |
CRG98_019151 | CRG98_023300 | A0A2I0JW08 | A0A2I0JJ28 | DOG1 domain-containing protein. | Uncharacterized protein. | 0.498 |
CRG98_019151 | CRG98_029004 | A0A2I0JW08 | A0A2I0J301 | DOG1 domain-containing protein. | Uncharacterized protein. | 0.575 |
CRG98_019151 | CRG98_030763 | A0A2I0JW08 | A0A2I0IY14 | DOG1 domain-containing protein. | Uncharacterized protein. | 0.528 |
CRG98_019151 | CRG98_032296 | A0A2I0JW08 | A0A218VS50 | DOG1 domain-containing protein. | Uncharacterized protein. | 0.518 |
CRG98_019151 | CRG98_037799 | A0A2I0JW08 | A0A2I0ICU3 | DOG1 domain-containing protein. | Uncharacterized protein. | 0.527 |
CRG98_019151 | CRG98_038216 | A0A2I0JW08 | A0A218Y1X9 | DOG1 domain-containing protein. | Uncharacterized protein. | 0.534 |
CRG98_019151 | CRG98_041341 | A0A2I0JW08 | A0A2I0I2S8 | DOG1 domain-containing protein. | Uncharacterized protein. | 0.521 |
CRG98_019151 | CRG98_046581 | A0A2I0JW08 | A0A2I0HMS6 | DOG1 domain-containing protein. | Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. | 0.474 |
CRG98_023300 | CRG98_016375 | A0A2I0JJ28 | A0A2I0K4X2 | Uncharacterized protein. | LOB domain-containing protein. | 0.507 |
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