STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_046581Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. (281 aa)    
Predicted Functional Partners:
CRG98_037799
Uncharacterized protein.
  
     0.492
CRG98_041341
Uncharacterized protein.
  
     0.485
CRG98_030763
Uncharacterized protein.
  
     0.485
CRG98_016375
LOB domain-containing protein.
  
     0.484
CRG98_029004
Uncharacterized protein.
  
     0.483
CRG98_019151
DOG1 domain-containing protein.
  
     0.474
CRG98_032296
Uncharacterized protein.
  
     0.472
CRG98_038216
Uncharacterized protein.
  
     0.471
CRG98_023300
Uncharacterized protein.
  
     0.469
CRG98_011010
PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family.
  
     0.466
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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