STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_045722Uncharacterized protein. (81 aa)    
Predicted Functional Partners:
CRG98_040471
HATPase_c domain-containing protein.
   
 0.930
CRG98_043059
Uncharacterized protein.
    
 0.921
CRG98_016158
Uncharacterized protein.
    
 0.921
CRG98_027508
HATPase_c domain-containing protein.
   
 0.919
CRG98_028658
HATPase_c domain-containing protein.
   
 0.919
CRG98_015462
HATPase_c domain-containing protein.
   
 0.919
CRG98_042162
SH3 domain-containing protein.
   
 0.919
CRG98_017118
HATPase_c domain-containing protein.
   
 0.919
CRG98_017119
Uncharacterized protein.
   
 0.919
CRG98_017120
Uncharacterized protein.
   
 0.919
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.