STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_044942RECA_2 domain-containing protein. (172 aa)    
Predicted Functional Partners:
CRG98_047652
3'-5' exonuclease domain-containing protein.
   
 0.997
CRG98_030670
Uncharacterized protein; Belongs to the RecA family.
  
0.987
CRG98_009189
RECA_2 domain-containing protein.
  
0.987
CRG98_028146
Uncharacterized protein.
   
 0.960
CRG98_000872
RECA_2 domain-containing protein.
   
 0.929
CRG98_030478
Uncharacterized protein.
    
 0.890
CRG98_030479
Uncharacterized protein; Belongs to the RecA family.
    
 0.890
CRG98_018385
DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Unwinds duplex DNA. Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination; Belongs to the RecA family. RAD51 subfamily.
  
 
0.886
CRG98_036104
RecQ_Zn_bind domain-containing protein.
   
 0.883
CRG98_036105
Uncharacterized protein.
   
 0.883
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.