STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_044762Uncharacterized protein. (492 aa)    
Predicted Functional Partners:
CRG98_033926
Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. Belongs to the plastocyanin family.
   
 0.618
CRG98_021701
Uncharacterized protein.
     
 0.594
CRG98_046491
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.543
CRG98_003291
Uncharacterized protein; Belongs to the multicopper oxidase family.
  
     0.490
CRG98_016639
CaM_binding domain-containing protein.
    
 0.485
CRG98_034176
SMN domain-containing protein.
    
 0.485
CRG98_024090
Uncharacterized protein.
    
 0.485
CRG98_047587
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.467
CRG98_047588
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.467
CRG98_045499
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.467
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.