STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_043613Uncharacterized protein. (831 aa)    
Predicted Functional Partners:
CRG98_029199
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.676
CRG98_029200
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.676
CRG98_020194
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.630
CRG98_020193
Uncharacterized protein.
    
  0.630
CRG98_020192
Uncharacterized protein.
    
  0.630
CRG98_006292
Uncharacterized protein.
    
  0.630
CRG98_006291
Uncharacterized protein.
    
  0.630
CRG98_000326
TPR_REGION domain-containing protein.
    
  0.574
CRG98_004170
PCI domain-containing protein.
    
  0.571
CRG98_029206
QLQ domain-containing protein.
   
 0.566
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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