Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRG98_004854 | CRG98_017046 | A0A2I0L227 | A0A2I0K243 | F-box domain-containing protein. | Uncharacterized protein. | 0.499 |
CRG98_004854 | CRG98_027644 | A0A2I0L227 | A0A2I0J6Z6 | F-box domain-containing protein. | TF-B3 domain-containing protein. | 0.463 |
CRG98_004854 | CRG98_034026 | A0A2I0L227 | A0A218X862 | F-box domain-containing protein. | Uncharacterized protein. | 0.440 |
CRG98_004854 | CRG98_034459 | A0A2I0L227 | A0A2I0IMD9 | F-box domain-containing protein. | Methyltransferase. | 0.501 |
CRG98_004854 | CRG98_034746 | A0A2I0L227 | A0A2I0ILC1 | F-box domain-containing protein. | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.472 |
CRG98_004854 | CRG98_041901 | A0A2I0L227 | A0A2I0I0X5 | F-box domain-containing protein. | NAC domain-containing protein. | 0.453 |
CRG98_004854 | CRG98_042636 | A0A2I0L227 | A0A2I0HZ01 | F-box domain-containing protein. | TCP domain-containing protein. | 0.500 |
CRG98_004854 | CRG98_048331 | A0A2I0L227 | A0A2I0HHX1 | F-box domain-containing protein. | PMR5N domain-containing protein. | 0.520 |
CRG98_017046 | CRG98_004854 | A0A2I0K243 | A0A2I0L227 | Uncharacterized protein. | F-box domain-containing protein. | 0.499 |
CRG98_017046 | CRG98_027644 | A0A2I0K243 | A0A2I0J6Z6 | Uncharacterized protein. | TF-B3 domain-containing protein. | 0.473 |
CRG98_017046 | CRG98_027910 | A0A2I0K243 | A0A218XKK0 | Uncharacterized protein. | F-box domain-containing protein. | 0.514 |
CRG98_017046 | CRG98_034459 | A0A2I0K243 | A0A2I0IMD9 | Uncharacterized protein. | Methyltransferase. | 0.466 |
CRG98_017046 | CRG98_034746 | A0A2I0K243 | A0A2I0ILC1 | Uncharacterized protein. | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.505 |
CRG98_017046 | CRG98_035049 | A0A2I0K243 | A0A2I0IKM6 | Uncharacterized protein. | Uncharacterized protein. | 0.451 |
CRG98_017046 | CRG98_041901 | A0A2I0K243 | A0A2I0I0X5 | Uncharacterized protein. | NAC domain-containing protein. | 0.410 |
CRG98_017046 | CRG98_042636 | A0A2I0K243 | A0A2I0HZ01 | Uncharacterized protein. | TCP domain-containing protein. | 0.496 |
CRG98_017046 | CRG98_048331 | A0A2I0K243 | A0A2I0HHX1 | Uncharacterized protein. | PMR5N domain-containing protein. | 0.494 |
CRG98_027644 | CRG98_004854 | A0A2I0J6Z6 | A0A2I0L227 | TF-B3 domain-containing protein. | F-box domain-containing protein. | 0.463 |
CRG98_027644 | CRG98_017046 | A0A2I0J6Z6 | A0A2I0K243 | TF-B3 domain-containing protein. | Uncharacterized protein. | 0.473 |
CRG98_027644 | CRG98_027910 | A0A2I0J6Z6 | A0A218XKK0 | TF-B3 domain-containing protein. | F-box domain-containing protein. | 0.487 |
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