STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_041042Uncharacterized protein; Belongs to the plant dehydrin family. (202 aa)    
Predicted Functional Partners:
CRG98_038647
Uncharacterized protein.
    
   0.703
CRG98_038646
Uncharacterized protein.
    
   0.703
CRG98_040293
NAD(P)-bd_dom domain-containing protein.
    
  0.586
CRG98_027955
Uncharacterized protein.
  
   
 0.586
CRG98_022557
Uncharacterized protein.
  
     0.523
CRG98_005933
Uncharacterized protein.
  
     0.522
CRG98_039433
Uncharacterized protein.
  
   
 0.520
CRG98_025651
Uncharacterized protein.
  
 
   0.518
CRG98_032512
Uncharacterized protein.
  
     0.516
CRG98_014539
Uncharacterized protein.
  
   
 0.510
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.