Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRG98_002065 | CRG98_016634 | A0A2I0L9U3 | A0A2I0K362 | Topoisom_I_N domain-containing protein. | ERCC4 domain-containing protein. | 0.801 |
CRG98_002065 | CRG98_022834 | A0A2I0L9U3 | A0A2I0JLI4 | Topoisom_I_N domain-containing protein. | DNA_ligase_A_C domain-containing protein. | 0.515 |
CRG98_002065 | CRG98_022835 | A0A2I0L9U3 | A0A2I0JKI6 | Topoisom_I_N domain-containing protein. | DNA ligase. | 0.515 |
CRG98_002065 | CRG98_039391 | A0A2I0L9U3 | A0A2I0I871 | Topoisom_I_N domain-containing protein. | FHA domain-containing protein. | 0.814 |
CRG98_002065 | CRG98_045102 | A0A2I0L9U3 | A0A2I0HS77 | Topoisom_I_N domain-containing protein. | zf-C2HE domain-containing protein. | 0.637 |
CRG98_002065 | CRG98_045103 | A0A2I0L9U3 | A0A2I0HTF8 | Topoisom_I_N domain-containing protein. | Macro domain-containing protein. | 0.637 |
CRG98_002065 | CRG98_045461 | A0A2I0L9U3 | A0A218XB13 | Topoisom_I_N domain-containing protein. | BHLH domain-containing protein. | 0.637 |
CRG98_002065 | CRG98_047055 | A0A2I0L9U3 | A0A2I0HLD9 | Topoisom_I_N domain-containing protein. | WLM domain-containing protein. | 0.595 |
CRG98_002065 | CRG98_049843 | A0A2I0L9U3 | A0A2I0H1S3 | Topoisom_I_N domain-containing protein. | TOPEUc domain-containing protein. | 0.481 |
CRG98_016634 | CRG98_002065 | A0A2I0K362 | A0A2I0L9U3 | ERCC4 domain-containing protein. | Topoisom_I_N domain-containing protein. | 0.801 |
CRG98_016634 | CRG98_022834 | A0A2I0K362 | A0A2I0JLI4 | ERCC4 domain-containing protein. | DNA_ligase_A_C domain-containing protein. | 0.813 |
CRG98_016634 | CRG98_022835 | A0A2I0K362 | A0A2I0JKI6 | ERCC4 domain-containing protein. | DNA ligase. | 0.813 |
CRG98_016634 | CRG98_039391 | A0A2I0K362 | A0A2I0I871 | ERCC4 domain-containing protein. | FHA domain-containing protein. | 0.746 |
CRG98_016634 | CRG98_045102 | A0A2I0K362 | A0A2I0HS77 | ERCC4 domain-containing protein. | zf-C2HE domain-containing protein. | 0.440 |
CRG98_016634 | CRG98_045103 | A0A2I0K362 | A0A2I0HTF8 | ERCC4 domain-containing protein. | Macro domain-containing protein. | 0.440 |
CRG98_016634 | CRG98_045461 | A0A2I0K362 | A0A218XB13 | ERCC4 domain-containing protein. | BHLH domain-containing protein. | 0.440 |
CRG98_016634 | CRG98_049843 | A0A2I0K362 | A0A2I0H1S3 | ERCC4 domain-containing protein. | TOPEUc domain-containing protein. | 0.801 |
CRG98_016634 | CRG98_050227 | A0A2I0K362 | A0A2I0GK19 | ERCC4 domain-containing protein. | Topo_C_assoc domain-containing protein. | 0.801 |
CRG98_022834 | CRG98_002065 | A0A2I0JLI4 | A0A2I0L9U3 | DNA_ligase_A_C domain-containing protein. | Topoisom_I_N domain-containing protein. | 0.515 |
CRG98_022834 | CRG98_016634 | A0A2I0JLI4 | A0A2I0K362 | DNA_ligase_A_C domain-containing protein. | ERCC4 domain-containing protein. | 0.813 |
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