STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_039140PORR domain-containing protein. (530 aa)    
Predicted Functional Partners:
CRG98_038341
RNase III domain-containing protein.
  
 
 
 0.789
CRG98_013707
Uncharacterized protein.
  
 
 
 0.762
CRG98_017752
Uncharacterized protein.
  
   
 0.679
CRG98_027282
Uncharacterized protein.
  
   
 0.664
CRG98_016845
Uncharacterized protein.
  
 
 
 0.634
CRG98_016165
Uncharacterized protein.
  
   
 0.623
CRG98_016846
Uncharacterized protein.
  
 
 
 0.620
CRG98_030561
Uncharacterized protein.
  
 
 
 0.606
CRG98_050254
Uncharacterized protein.
  
 
 
 0.602
CRG98_033024
Uncharacterized protein.
  
 
   0.570
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.