STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_039354Uncharacterized protein. (367 aa)    
Predicted Functional Partners:
CRG98_017534
Cation_ATPase_C domain-containing protein; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
  
 
 0.690
CRG98_007125
Cation_ATPase_C domain-containing protein; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
  
 
 0.687
CRG98_014053
ALA-interacting subunit; Belongs to the CDC50/LEM3 family.
    
 0.644
CRG98_047782
Uncharacterized protein.
    
 0.644
CRG98_033614
ALA-interacting subunit; Belongs to the CDC50/LEM3 family.
    
 0.644
CRG98_026177
Uncharacterized protein; Belongs to the calmodulin family.
   
 
 0.553
CRG98_011327
Uncharacterized protein.
   
 0.550
CRG98_011328
Uncharacterized protein.
   
 0.550
CRG98_039353
Cation_ATPase_N domain-containing protein.
  
     0.541
CRG98_039355
Cation_ATPase_C domain-containing protein; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
  
     0.540
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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