STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_038527Peptidase_M16 domain-containing protein. (225 aa)    
Predicted Functional Partners:
CRG98_002522
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
 0.992
CRG98_030258
Uncharacterized protein.
   
 0.990
CRG98_033587
Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.
   
 0.990
CRG98_026217
NmrA domain-containing protein.
   
 0.989
CRG98_038966
Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.
   
 0.984
CRG98_026555
UCR_hinge domain-containing protein.
   
 0.984
CRG98_046588
Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.980
CRG98_013990
Uncharacterized protein.
   
 0.980
CRG98_050114
Uncharacterized protein.
   
 0.976
CRG98_045945
Cytochrome c domain-containing protein.
   
 0.976
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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