STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_038265S1 motif domain-containing protein. (198 aa)    
Predicted Functional Partners:
CRG98_009737
S4 RNA-binding domain-containing protein.
   
  0.999
CRG98_045614
Uncharacterized protein.
   
 0.999
CRG98_045181
Uncharacterized protein.
   
 0.999
CRG98_046985
Uncharacterized protein.
  
 0.999
CRG98_044778
S1 domain-containing protein.
   
 0.999
CRG98_027778
Tr-type G domain-containing protein.
    
 0.999
CRG98_012995
KH_dom_type_1 domain-containing protein.
   
 0.999
CRG98_004251
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.999
CRG98_020684
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
  0.998
CRG98_031142
WD_REPEATS_REGION domain-containing protein.
   
  0.998
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
Server load: low (22%) [HD]