Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRG98_004251 | CRG98_009737 | A0A2I0L3V1 | A0A218XIS8 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | S4 RNA-binding domain-containing protein. | 0.999 |
CRG98_004251 | CRG98_012995 | A0A2I0L3V1 | A0A2I0KEN8 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | KH_dom_type_1 domain-containing protein. | 0.996 |
CRG98_004251 | CRG98_020684 | A0A2I0L3V1 | A0A218WKF5 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.999 |
CRG98_004251 | CRG98_031142 | A0A2I0L3V1 | A0A218XAS5 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | WD_REPEATS_REGION domain-containing protein. | 0.990 |
CRG98_004251 | CRG98_038265 | A0A2I0L3V1 | A0A2I0IBK6 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | S1 motif domain-containing protein. | 0.999 |
CRG98_004251 | CRG98_044778 | A0A2I0L3V1 | A0A2I0HT08 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | S1 domain-containing protein. | 0.996 |
CRG98_004251 | CRG98_045181 | A0A2I0L3V1 | A0A218XS68 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Uncharacterized protein. | 0.996 |
CRG98_004251 | CRG98_045614 | A0A2I0L3V1 | A0A218XQ59 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Uncharacterized protein. | 0.974 |
CRG98_004251 | CRG98_046985 | A0A2I0L3V1 | A0A2I0HLM3 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Uncharacterized protein. | 0.999 |
CRG98_009737 | CRG98_004251 | A0A218XIS8 | A0A2I0L3V1 | S4 RNA-binding domain-containing protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.999 |
CRG98_009737 | CRG98_012995 | A0A218XIS8 | A0A2I0KEN8 | S4 RNA-binding domain-containing protein. | KH_dom_type_1 domain-containing protein. | 0.997 |
CRG98_009737 | CRG98_020684 | A0A218XIS8 | A0A218WKF5 | S4 RNA-binding domain-containing protein. | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.999 |
CRG98_009737 | CRG98_027778 | A0A218XIS8 | A0A2I0J7J9 | S4 RNA-binding domain-containing protein. | Tr-type G domain-containing protein. | 0.805 |
CRG98_009737 | CRG98_031142 | A0A218XIS8 | A0A218XAS5 | S4 RNA-binding domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.993 |
CRG98_009737 | CRG98_038265 | A0A218XIS8 | A0A2I0IBK6 | S4 RNA-binding domain-containing protein. | S1 motif domain-containing protein. | 0.999 |
CRG98_009737 | CRG98_044778 | A0A218XIS8 | A0A2I0HT08 | S4 RNA-binding domain-containing protein. | S1 domain-containing protein. | 0.995 |
CRG98_009737 | CRG98_045181 | A0A218XIS8 | A0A218XS68 | S4 RNA-binding domain-containing protein. | Uncharacterized protein. | 0.997 |
CRG98_009737 | CRG98_045614 | A0A218XIS8 | A0A218XQ59 | S4 RNA-binding domain-containing protein. | Uncharacterized protein. | 0.994 |
CRG98_009737 | CRG98_046985 | A0A218XIS8 | A0A2I0HLM3 | S4 RNA-binding domain-containing protein. | Uncharacterized protein. | 0.998 |
CRG98_012995 | CRG98_004251 | A0A2I0KEN8 | A0A2I0L3V1 | KH_dom_type_1 domain-containing protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.996 |
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