Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRG98_001681 | CRG98_034004 | A0A2I0LB22 | A0A2I0INV8 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.552 |
CRG98_001681 | CRG98_037521 | A0A2I0LB22 | A0A2I0IDI9 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.811 |
CRG98_003595 | CRG98_003596 | A0A2I0L5Q7 | A0A2I0L7F5 | Uncharacterized protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.518 |
CRG98_003595 | CRG98_004872 | A0A2I0L5Q7 | A0A218WXL5 | Uncharacterized protein. | F-box domain-containing protein. | 0.415 |
CRG98_003595 | CRG98_009025 | A0A2I0L5Q7 | A0A218XRP8 | Uncharacterized protein. | F-box domain-containing protein. | 0.577 |
CRG98_003595 | CRG98_027896 | A0A2I0L5Q7 | A0A2I0J6R9 | Uncharacterized protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.496 |
CRG98_003595 | CRG98_037521 | A0A2I0L5Q7 | A0A2I0IDI9 | Uncharacterized protein. | Uncharacterized protein. | 0.855 |
CRG98_003595 | CRG98_046750 | A0A2I0L5Q7 | A0A218WCX3 | Uncharacterized protein. | F-box domain-containing protein. | 0.515 |
CRG98_003596 | CRG98_003595 | A0A2I0L7F5 | A0A2I0L5Q7 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.518 |
CRG98_003596 | CRG98_009025 | A0A2I0L7F5 | A0A218XRP8 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | F-box domain-containing protein. | 0.530 |
CRG98_003596 | CRG98_037521 | A0A2I0L7F5 | A0A2I0IDI9 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.855 |
CRG98_004872 | CRG98_003595 | A0A218WXL5 | A0A2I0L5Q7 | F-box domain-containing protein. | Uncharacterized protein. | 0.415 |
CRG98_004872 | CRG98_009025 | A0A218WXL5 | A0A218XRP8 | F-box domain-containing protein. | F-box domain-containing protein. | 0.868 |
CRG98_004872 | CRG98_034004 | A0A218WXL5 | A0A2I0INV8 | F-box domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.402 |
CRG98_004872 | CRG98_037521 | A0A218WXL5 | A0A2I0IDI9 | F-box domain-containing protein. | Uncharacterized protein. | 0.890 |
CRG98_009025 | CRG98_003595 | A0A218XRP8 | A0A2I0L5Q7 | F-box domain-containing protein. | Uncharacterized protein. | 0.577 |
CRG98_009025 | CRG98_003596 | A0A218XRP8 | A0A2I0L7F5 | F-box domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.530 |
CRG98_009025 | CRG98_004872 | A0A218XRP8 | A0A218WXL5 | F-box domain-containing protein. | F-box domain-containing protein. | 0.868 |
CRG98_009025 | CRG98_034004 | A0A218XRP8 | A0A2I0INV8 | F-box domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.618 |
CRG98_009025 | CRG98_037521 | A0A218XRP8 | A0A2I0IDI9 | F-box domain-containing protein. | Uncharacterized protein. | 0.914 |
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