STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_036857Uncharacterized protein. (1695 aa)    
Predicted Functional Partners:
CRG98_038009
C2H2-type domain-containing protein.
  
 
 0.569
CRG98_037420
Homeobox domain-containing protein.
  
 
   0.558
CRG98_040892
SAP domain-containing protein.
  
 
  0.537
CRG98_024474
UBA domain-containing protein.
    
 0.536
CRG98_027262
Uncharacterized protein.
  
 
  0.535
CRG98_016639
CaM_binding domain-containing protein.
    
 0.521
CRG98_034176
SMN domain-containing protein.
    
 0.521
CRG98_024090
Uncharacterized protein.
    
 0.521
CRG98_029206
QLQ domain-containing protein.
    
 0.515
CRG98_015440
Helicase ATP-binding domain-containing protein.
    
 0.515
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
Server load: low (26%) [HD]