Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRG98_002736 | CRG98_007035 | A0A2I0L7Y8 | A0A2I0KW23 | CYCLIN domain-containing protein. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | 0.986 |
CRG98_002736 | CRG98_007036 | A0A2I0L7Y8 | A0A2I0KW26 | CYCLIN domain-containing protein. | Uncharacterized protein. | 0.986 |
CRG98_002736 | CRG98_009848 | A0A2I0L7Y8 | A0A2I0KMH7 | CYCLIN domain-containing protein. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.945 |
CRG98_002736 | CRG98_016970 | A0A2I0L7Y8 | A0A218XT56 | CYCLIN domain-containing protein. | Mediator of RNA polymerase II transcription subunit 21; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.956 |
CRG98_002736 | CRG98_033354 | A0A2I0L7Y8 | A0A2I0IQF6 | CYCLIN domain-containing protein. | Uncharacterized protein. | 0.962 |
CRG98_002736 | CRG98_034252 | A0A2I0L7Y8 | A0A2I0IN80 | CYCLIN domain-containing protein. | Med12 domain-containing protein. | 0.956 |
CRG98_002736 | CRG98_043336 | A0A2I0L7Y8 | A0A2I0HXR1 | CYCLIN domain-containing protein. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.945 |
CRG98_002736 | CRG98_044264 | A0A2I0L7Y8 | A0A2I0HV04 | CYCLIN domain-containing protein. | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.431 |
CRG98_002736 | CRG98_046805 | A0A2I0L7Y8 | A0A218XD45 | CYCLIN domain-containing protein. | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | 0.991 |
CRG98_002737 | CRG98_007035 | A0A2I0L7T8 | A0A2I0KW23 | Uncharacterized protein. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | 0.986 |
CRG98_002737 | CRG98_007036 | A0A2I0L7T8 | A0A2I0KW26 | Uncharacterized protein. | Uncharacterized protein. | 0.986 |
CRG98_002737 | CRG98_009848 | A0A2I0L7T8 | A0A2I0KMH7 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.945 |
CRG98_002737 | CRG98_016970 | A0A2I0L7T8 | A0A218XT56 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 21; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.956 |
CRG98_002737 | CRG98_033354 | A0A2I0L7T8 | A0A2I0IQF6 | Uncharacterized protein. | Uncharacterized protein. | 0.962 |
CRG98_002737 | CRG98_034252 | A0A2I0L7T8 | A0A2I0IN80 | Uncharacterized protein. | Med12 domain-containing protein. | 0.956 |
CRG98_002737 | CRG98_043336 | A0A2I0L7T8 | A0A2I0HXR1 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.945 |
CRG98_002737 | CRG98_044264 | A0A2I0L7T8 | A0A2I0HV04 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.431 |
CRG98_002737 | CRG98_046805 | A0A2I0L7T8 | A0A218XD45 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | 0.991 |
CRG98_007035 | CRG98_002736 | A0A2I0KW23 | A0A2I0L7Y8 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | CYCLIN domain-containing protein. | 0.986 |
CRG98_007035 | CRG98_002737 | A0A2I0KW23 | A0A2I0L7T8 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | Uncharacterized protein. | 0.986 |
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