STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_034814Uncharacterized protein. (231 aa)    
Predicted Functional Partners:
CRG98_023182
Uncharacterized protein.
  
 
 0.978
CRG98_038830
Uncharacterized protein.
  
 
 0.977
CRG98_034051
2Fe-2S ferredoxin-type domain-containing protein.
  
 
 0.975
CRG98_012561
Uncharacterized protein.
   
 
 0.970
CRG98_042755
Uncharacterized protein.
   
 
 0.968
CRG98_001593
Uncharacterized protein.
   
 
 0.967
CRG98_036113
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
   
 
 0.965
CRG98_045534
Uncharacterized protein.
   
 
 0.960
CRG98_034881
Uncharacterized protein.
   
 
 0.959
CRG98_046932
Uncharacterized protein.
   
 
 0.951
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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