STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_032499Ribosomal_S17_N domain-containing protein. (130 aa)    
Predicted Functional Partners:
CRG98_002862
Ubiquitin-like domain-containing protein.
   
 0.999
CRG98_031665
Ribos_L4_asso_C domain-containing protein.
  
 0.998
CRG98_029375
EF-1-gamma C-terminal domain-containing protein.
   
 
 0.998
CRG98_029374
Uncharacterized protein; Belongs to the GST superfamily.
   
 
 0.998
CRG98_011537
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.997
CRG98_027692
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.997
CRG98_007964
Uncharacterized protein.
  
 0.997
CRG98_005515
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 0.997
CRG98_021274
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.997
CRG98_034708
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.997
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.