STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_031620MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (419 aa)    
Predicted Functional Partners:
CRG98_004716
Epimerase domain-containing protein.
    
 
 0.624
CRG98_040366
MFS domain-containing protein.
  
     0.521
CAD
Cinnamyl alcohol dehydrogenase.
    
 
 0.487
CRG98_050164
Epimerase domain-containing protein.
    
 
 0.480
CRG98_049545
Uncharacterized protein.
    
 
 0.480
CRG98_048125
Uncharacterized protein.
    
 
 0.480
CRG98_048083
Epimerase domain-containing protein.
    
 
 0.480
CRG98_028309
Uncharacterized protein.
    
 
 0.480
CRG98_033263
Uncharacterized protein.
  
     0.465
CRG98_024550
Uncharacterized protein.
      
 0.450
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.