STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_027781ABC1 domain-containing protein. (524 aa)    
Predicted Functional Partners:
CRG98_026624
Mg-por_mtran_C domain-containing protein.
   
 0.770
CRG98_016697
Uncharacterized protein.
   
 0.770
CRG98_038966
Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.
    
 0.669
CRG98_038830
Uncharacterized protein.
   
 
 0.669
CRG98_022038
COX1 domain-containing protein.
     
 0.650
CRG98_047292
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
   
 
  0.625
CRG98_017961
Uncharacterized protein.
    
 0.617
CRG98_017962
Uncharacterized protein.
    
 0.617
CRG98_015505
Uncharacterized protein.
    
 0.617
CRG98_047570
Uncharacterized protein.
    
  0.610
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.