Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRG98_000050 | CRG98_000633 | A0A2I0LFX2 | A0A218W8S3 | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. | 0.996 |
CRG98_000050 | CRG98_025339 | A0A2I0LFX2 | A0A2I0JDF4 | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | Peptide-methionine (R)-S-oxide reductase; Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R- enantiomer. | 0.759 |
CRG98_000050 | CRG98_030525 | A0A2I0LFX2 | A0A2I0IZA9 | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | Uncharacterized protein. | 0.999 |
CRG98_000050 | CRG98_031618 | A0A2I0LFX2 | A0A2I0IVD2 | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | Uncharacterized protein. | 0.999 |
CRG98_000050 | CRG98_046652 | A0A2I0LFX2 | A0A2I0HMI1 | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | Uncharacterized protein. | 0.834 |
CRG98_000050 | CRG98_047290 | A0A2I0LFX2 | A0A2I0HL77 | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | Thioredoxin domain-containing protein. | 0.582 |
CRG98_000633 | CRG98_000050 | A0A218W8S3 | A0A2I0LFX2 | S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | 0.996 |
CRG98_000633 | CRG98_025339 | A0A218W8S3 | A0A2I0JDF4 | S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. | Peptide-methionine (R)-S-oxide reductase; Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R- enantiomer. | 0.739 |
CRG98_000633 | CRG98_030525 | A0A218W8S3 | A0A2I0IZA9 | S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. | Uncharacterized protein. | 0.999 |
CRG98_000633 | CRG98_031618 | A0A218W8S3 | A0A2I0IVD2 | S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. | Uncharacterized protein. | 0.996 |
CRG98_000633 | CRG98_046652 | A0A218W8S3 | A0A2I0HMI1 | S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. | Uncharacterized protein. | 0.834 |
CRG98_012979 | CRG98_025339 | A0A2I0KDP4 | A0A2I0JDF4 | PMSR domain-containing protein. | Peptide-methionine (R)-S-oxide reductase; Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R- enantiomer. | 0.909 |
CRG98_012979 | CRG98_033932 | A0A2I0KDP4 | A0A218X8V6 | PMSR domain-containing protein. | Thioredoxin domain-containing protein. | 0.767 |
CRG98_012979 | CRG98_047290 | A0A2I0KDP4 | A0A2I0HL77 | PMSR domain-containing protein. | Thioredoxin domain-containing protein. | 0.876 |
CRG98_021687 | CRG98_025339 | A0A2I0JNQ0 | A0A2I0JDF4 | PMSR domain-containing protein. | Peptide-methionine (R)-S-oxide reductase; Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R- enantiomer. | 0.920 |
CRG98_021687 | CRG98_033932 | A0A2I0JNQ0 | A0A218X8V6 | PMSR domain-containing protein. | Thioredoxin domain-containing protein. | 0.767 |
CRG98_021687 | CRG98_047290 | A0A2I0JNQ0 | A0A2I0HL77 | PMSR domain-containing protein. | Thioredoxin domain-containing protein. | 0.876 |
CRG98_025339 | CRG98_000050 | A0A2I0JDF4 | A0A2I0LFX2 | Peptide-methionine (R)-S-oxide reductase; Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R- enantiomer. | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | 0.759 |
CRG98_025339 | CRG98_000633 | A0A2I0JDF4 | A0A218W8S3 | Peptide-methionine (R)-S-oxide reductase; Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R- enantiomer. | S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. | 0.739 |
CRG98_025339 | CRG98_012979 | A0A2I0JDF4 | A0A2I0KDP4 | Peptide-methionine (R)-S-oxide reductase; Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R- enantiomer. | PMSR domain-containing protein. | 0.909 |
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