STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_025339Peptide-methionine (R)-S-oxide reductase; Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R- enantiomer. (107 aa)    
Predicted Functional Partners:
CRG98_021687
PMSR domain-containing protein.
 
 
 0.920
CRG98_040133
PMSR domain-containing protein.
 
 
 0.913
CRG98_012979
PMSR domain-containing protein.
 
 
 0.909
CRG98_047290
Thioredoxin domain-containing protein.
  
 0.836
CRG98_046652
Uncharacterized protein.
    
 
 0.774
CRG98_031618
Uncharacterized protein.
    
 
 0.765
CRG98_033932
Thioredoxin domain-containing protein.
   
 0.760
CRG98_000050
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
 
 0.759
CRG98_030525
Uncharacterized protein.
   
   0.743
CRG98_000633
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
   0.739
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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