STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_024657Uncharacterized protein. (168 aa)    
Predicted Functional Partners:
CRG98_031545
WD_REPEATS_REGION domain-containing protein.
   
 0.600
CRG98_025331
Uncharacterized protein.
   
 0.600
CRG98_040109
Uncharacterized protein.
    
 0.589
CRG98_028554
Uncharacterized protein.
    
 0.589
CRG98_000457
Uncharacterized protein.
   
 0.568
CRG98_000456
Uncharacterized protein.
   
 0.568
CRG98_030284
Uncharacterized protein.
   
  0.558
CRG98_044284
Uncharacterized protein.
   
  0.558
CRG98_032586
Uncharacterized protein.
   
  0.558
CRG98_032587
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
  0.558
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.