Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRG98_000040 | CRG98_001262 | A0A2I0LFW1 | A0A2I0LCB7 | Uncharacterized protein. | Uncharacterized protein. | 0.992 |
CRG98_000040 | CRG98_001263 | A0A2I0LFW1 | A0A2I0LCA5 | Uncharacterized protein. | Nup54 domain-containing protein. | 0.992 |
CRG98_000040 | CRG98_006661 | A0A2I0LFW1 | A0A218WYB4 | Uncharacterized protein. | C2H2-type domain-containing protein. | 0.994 |
CRG98_000040 | CRG98_020168 | A0A2I0LFW1 | A0A2I0JSW5 | Uncharacterized protein. | Uncharacterized protein. | 0.785 |
CRG98_000040 | CRG98_032995 | A0A2I0LFW1 | A0A218XRI0 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
CRG98_000040 | CRG98_036644 | A0A2I0LFW1 | A0A2I0IHP9 | Uncharacterized protein. | Nuclear pore protein. | 0.996 |
CRG98_000040 | CRG98_036645 | A0A2I0LFW1 | A0A2I0IFT6 | Uncharacterized protein. | Nuclear pore protein. | 0.996 |
CRG98_000040 | CRG98_038132 | A0A2I0LFW1 | A0A2I0IBX5 | Uncharacterized protein. | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | 0.994 |
CRG98_000040 | CRG98_044176 | A0A2I0LFW1 | A0A2I0HUY4 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. | 0.999 |
CRG98_000040 | GATC | A0A2I0LFW1 | A0A218W691 | Uncharacterized protein. | Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatC family. | 0.994 |
CRG98_001262 | CRG98_000040 | A0A2I0LCB7 | A0A2I0LFW1 | Uncharacterized protein. | Uncharacterized protein. | 0.992 |
CRG98_001262 | CRG98_006661 | A0A2I0LCB7 | A0A218WYB4 | Uncharacterized protein. | C2H2-type domain-containing protein. | 0.985 |
CRG98_001262 | CRG98_020168 | A0A2I0LCB7 | A0A2I0JSW5 | Uncharacterized protein. | Uncharacterized protein. | 0.706 |
CRG98_001262 | CRG98_032995 | A0A2I0LCB7 | A0A218XRI0 | Uncharacterized protein. | Uncharacterized protein. | 0.968 |
CRG98_001262 | CRG98_036644 | A0A2I0LCB7 | A0A2I0IHP9 | Uncharacterized protein. | Nuclear pore protein. | 0.986 |
CRG98_001262 | CRG98_036645 | A0A2I0LCB7 | A0A2I0IFT6 | Uncharacterized protein. | Nuclear pore protein. | 0.986 |
CRG98_001262 | CRG98_038132 | A0A2I0LCB7 | A0A2I0IBX5 | Uncharacterized protein. | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | 0.987 |
CRG98_001262 | CRG98_044176 | A0A2I0LCB7 | A0A2I0HUY4 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. | 0.991 |
CRG98_001262 | GATC | A0A2I0LCB7 | A0A218W691 | Uncharacterized protein. | Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatC family. | 0.987 |
CRG98_001263 | CRG98_000040 | A0A2I0LCA5 | A0A2I0LFW1 | Nup54 domain-containing protein. | Uncharacterized protein. | 0.992 |
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