STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_020076Amine oxidase; Belongs to the copper/topaquinone oxidase family. (193 aa)    
Predicted Functional Partners:
CRG98_036488
Aspartate aminotransferase.
     
 0.884
CRG98_029965
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
     
 0.880
CRG98_020135
Thymidylat_synt domain-containing protein.
     
 0.880
CRG98_020134
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
     
 0.880
CRG98_020400
Amine oxidase; Belongs to the copper/topaquinone oxidase family.
  
  
  0.858
CRG98_016583
Uncharacterized protein.
   
 
 0.849
CRG98_033618
Amino_oxidase domain-containing protein.
   
 
 0.843
CRG98_007040
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.842
CRG98_022178
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.842
CRG98_002246
Amino_oxidase domain-containing protein.
   
 
 0.841
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.